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GHG feature profiling with multiple definitions

dataset
posted on 18.08.2021, 14:50 by Wenjing KangWenjing Kang, Bastian Fromm, Inna Biryukova, Marc FriedländerMarc Friedländer

This is the Supplemental Data 13 of the MapToCleave study.


This dataset is related to Figure 6E. The GHG feature is profiled based on the different definitions that are described in the method section “Identifying the presence of the GHG feature using different definitions”. The file “GHG_feature_MapToCleave.txt” shows the presence of the GHG features in the MapToCleave processed and unprocessed miRNA precursors. The file “GHG_feature_MirGeneDB.txt” shows the presence of the GHG features in MirGeneDB human miRNA precursors.


The files “in_vivo_highly_expressed_miRNA_precursor_IDs.txt” and “in_vivo_lowly_expressed_miRNA_precursor_IDs.txt” show the identity of miRNA precursors that were used to generate the plot of “in vivo expression” in the panel “miRNA processing efficiency” of Figure 6E.


The files “Chromatin_pri-miRNA_highly_processed_miRNA_precursor_IDs.txt” and “Chromatin_pri-miRNA_lowly_processed_miRNA_precursor_IDs.txt” show the identity of miRNA precursors that were used to generate the plot of “Chromatin pri-miRNA” in the panel “miRNA processing efficiency” of Figure 6E.

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Stockholm University

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